The Gene Ontology (GO) Cellular Component Ontology: integration with SAO (Subcellular Anatomy Ontology) and other recent developments

The Gene Ontology (GO) Cellular Component Ontology: integration with SAO (Subcellular Anatomy Ontology) and other recent developments

BACKGROUND The Gene Ontology (GO) (http://www.geneontology.org/) contains a set of terms for describing the activity and actions of gene products across all kingdoms of life. Each of these activities is executed in a location within a cell or in the vicinity of a cell. In order to capture this context, the GO includes a sub-ontology called the Cellular Component (CC) ontology (GO-CCO). The prim...

?Logic and Formal Ontology: Is the Final Formal Ontology Possible

Musa Akrami AbstractMany philosophers and logicians have contemplated the relationship between ontology and logic. The author of this paper, working within a Bolzanoan-Husserlian tradition of studying both ontology and logic, considers ontology as the science of the most general features of beings and the most general relations among them. He considers logic as the science concernin...

Walåyah and Islamic ontology

The present paper aims at clarifying the role of the concept “walåyah” in the philosophy of the unity of being in Islamic philosophy (waedat al-wujid). The concept “walåyah” is deeply built into the philosophic system of the Islamic theory of being, and moreover the dynamic aspect of this concept has always activated Islamic philosophy of existence and stimulated the thought of Islamic philosop...

Recent Developments in the ChEBI Ontology

How DoesStrawson Unify Epistemology, Ontology and Logic

Strawson’s conception of analysis as a ‘connective linguistic analysis’ makes it possible for him to achieve an indefinitely large range of ideas or concepts among them are certain numbers of fundamental, general and pervasive concepts or concept-types which not only are pre-theoretical or ahistorical, but also together constitute a structural framework only within whichlogic, ontology and epis...